About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides56424-
Paelopatides56425CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides56426L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides56427-
Paelopatides56428PROTEIN, PUTATIVE-RELATED
Paelopatides56429SOLUTE CARRIER FAMILY 22 MEMBER
Paelopatides56430PROTEIN CBG26694
Paelopatides56431PROTEIN CBG26694
Paelopatides56432ACROSIN-RELATED
Paelopatides56433CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides56434-
Paelopatides56435FTP DOMAIN-CONTAINING PROTEIN
Paelopatides56436-
Paelopatides56437-
Paelopatides56438CELL SURFACE GLYCOPROTEIN MUC18-RELATED
Paelopatides56439ALCOHOL DEHYDROGENASE RELATED
Paelopatides56440IP13529P
Paelopatides56441-
Paelopatides56442EPM2A-INTERACTING PROTEIN 1
Paelopatides56443FI04643P-RELATED
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