About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides56444FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides56445GTPASE, IMAP FAMILY MEMBER-RELATED
Paelopatides56446-
Paelopatides56447-
Paelopatides56448SI:CH211-196P9.1-RELATED
Paelopatides56449ENDONUCLEASE-RELATED
Paelopatides56450POL PROTEIN
Paelopatides56451-
Paelopatides56454WD-REPEAT PROTEIN
Paelopatides56455ZINC FINGER PROTEIN
Paelopatides56456-
Paelopatides56457-
Paelopatides56458ATP-DEPENDENT DNA HELICASE
Paelopatides56459-
Paelopatides56460HIGH MOBILITY GROUP PROTEIN 2
Paelopatides56461REVERSE TRANSCRIPTASES
Paelopatides56462-
Paelopatides56464REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides56465CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides56466-
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