About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides56637-
Paelopatides56638-
Paelopatides56639L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides56640INTEGRIN BETA SUBUNIT
Paelopatides56641-
Paelopatides56642CELL CYCLE CONTROL PROTEIN CWF22-RELATED
Paelopatides56643-
Paelopatides56644-
Paelopatides56645PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides56646-
Paelopatides56647-
Paelopatides56648POL PROTEIN
Paelopatides56649ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides56650G-PROTEIN COUPLED RECEPTOR
Paelopatides56651ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides56652POL PROTEIN
Paelopatides56653-
Paelopatides56655-
Paelopatides56656-
Paelopatides56657SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER
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