About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides56006-
Paelopatides56007-
Paelopatides56008NEPHRIN
Paelopatides56009TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides56010MYND-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides56011-
Paelopatides56012-
Paelopatides56013-
Paelopatides56014OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED
Paelopatides56015MYND-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides56016VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
Paelopatides56017FI04643P-RELATED
Paelopatides56018PROTEIN CBG26694
Paelopatides56019FI04643P-RELATED
Paelopatides56020-
Paelopatides56021-
Paelopatides56022KELCH PROTEIN
Paelopatides56023GALACTOSE-3-O-SULFOTRANSFERASE
Paelopatides56024KH DOMAIN CONTAINING RNA BINDING PROTEIN
Paelopatides56025KH DOMAIN CONTAINING RNA BINDING PROTEIN
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