About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides55986NUCLEOLUS AND NEURAL PROGENITOR PROTEIN
Paelopatides55987-
Paelopatides55988-
Paelopatides55989-
Paelopatides55990-
Paelopatides55991-
Paelopatides55992TRANSPOSON
Paelopatides55993PROTEIN CBG26694
Paelopatides55994PROTEIN CBG26694
Paelopatides55995-
Paelopatides55996RETROTRANSPOSON
Paelopatides55997RETROTRANSPOSON
Paelopatides55998-
Paelopatides55999-
Paelopatides56000-
Paelopatides56001COP9 SIGNALOSOME COMPLEX SUBUNIT 7/DENDRITIC CELL PROTEIN GA17
Paelopatides56002SKI ONCOGENE-RELATED
Paelopatides56003FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides56004ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides56005SI:CH211-108C17.2-RELATED-RELATED
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