About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides55966INTRAFLAGELLAR TRANSPORT PROTEIN 81 HOMOLOG
Paelopatides55967RHOMBOID PROTEASE
Paelopatides55968-
Paelopatides55969RIBONUCLEASE P PROTEIN SUBUNIT P38
Paelopatides55970AAA-FAMILY ATPASE
Paelopatides55971PROTEIN CBG26694
Paelopatides55972PARANEOPLASTIC ANTIGEN
Paelopatides55973POL PROTEIN
Paelopatides55974AMINO ACID TRANSPORTER
Paelopatides55975-
Paelopatides55976TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides55977TRANSPOSON
Paelopatides55978L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides55979N-ACETYLTRANSFERASE 9
Paelopatides55980ENOYL-COA HYDRATASE-RELATED
Paelopatides55981RNA DEMETHYLASE ALKBH5
Paelopatides55982REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides55983UNCHARACTERIZED
Paelopatides55984UNCHARACTERIZED
Paelopatides55985REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
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