About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides55943-
Paelopatides55944PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides55945MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10
Paelopatides55946MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10
Paelopatides55947REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides55948MITOFERRIN-1-RELATED
Paelopatides55949ADP-RIBOSYLGLYCOHYDROLASE
Paelopatides55950FERRITIN
Paelopatides55951ALPHA-2-MACROGLOBULIN RECEPTOR-ASSOCIATED PROTEIN
Paelopatides55952ARYLSULFATASE
Paelopatides55953SULFOTRANSFERASE SULT
Paelopatides55957U4/U6-ASSOCIATED RNA SPLICING FACTOR-RELATED
Paelopatides55958-
Paelopatides55959-
Paelopatides55960PROTEIN IWS1 HOMOLOG
Paelopatides55961-
Paelopatides55962-
Paelopatides55963-
Paelopatides55964-
Paelopatides55965INTRAFLAGELLAR TRANSPORT PROTEIN 81 HOMOLOG
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