About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides55923-
Paelopatides55924-
Paelopatides55925-
Paelopatides55926-
Paelopatides55927SULFATE TRANSPORTER
Paelopatides55928REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides55929TESTIS-EXPRESSED PROTEIN 11
Paelopatides55930TESTIS-EXPRESSED PROTEIN 11
Paelopatides55931HRAS-LIKE SUPPRESSOR - RELATED
Paelopatides55932-
Paelopatides55933-
Paelopatides55934ENZYMATIC POLYPROTEIN-RELATED
Paelopatides55935-
Paelopatides55936PROTEIN CBG26694
Paelopatides55937ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides55938-
Paelopatides55939-
Paelopatides55940-
Paelopatides55941REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides55942-
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