About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides56074-
Paelopatides56075PROTEIN CBG26694
Paelopatides56076NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE
Paelopatides56077ADHESION G PROTEIN-COUPLED RECEPTOR G7
Paelopatides56078RETROTRANSPOSON
Paelopatides56079RETROTRANSPOSON
Paelopatides56080-
Paelopatides56081-
Paelopatides56082-
Paelopatides56083PUTATIVE-RELATED
Paelopatides56084-
Paelopatides56085SI:CH211-108C17.2-RELATED-RELATED
Paelopatides56086ZGC:195170
Paelopatides56087TYROSINE-PROTEIN KINASE
Paelopatides56088CYSTEINE-RICH MOTOR NEURON 1 PROTEIN
Paelopatides56089CYSTEINE-RICH MOTOR NEURON 1 PROTEIN
Paelopatides56090DEHYDROGENASE/REDUCTASE (SDR FAMILY) MEMBER 4
Paelopatides56091-
Paelopatides56092PLEXIN
Paelopatides56093PLEXIN
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