About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides56094DEHYDROGENASE/REDUCTASE (SDR FAMILY) MEMBER 4
Paelopatides56095-
Paelopatides56096SYNOVIAL SARCOMA, X MEMBER
Paelopatides56097TOL-PAL SYSTEM PROTEIN TOLA
Paelopatides56098REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides56099-
Paelopatides56100MYND-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides56101SOLUTE CARRIER FAMILY 13 MEMBER
Paelopatides56102PROTEIN CBG26694
Paelopatides56104PROTEIN CBG26694
Paelopatides56105HEAT SHOCK PROTEIN 70KDA
Paelopatides56106CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides56107CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides56108RAN BINDING PROTEIN 9-RELATED
Paelopatides56109ISOAMYL ACETATE-HYDROLYZING ESTERASE 1
Paelopatides56110HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN
Paelopatides56111-
Paelopatides56112HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN
Paelopatides56113CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR FAMILY MEMBER
Paelopatides56114UNCHARACTERIZED
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