About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_33787-0.0KELCH PROTEIN
Bpl_scaf_33794-0.0
Bpl_scaf_33810-0.10BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
Bpl_scaf_33810-0.13SIDESTEP PROTEIN
Bpl_scaf_33810-1.11
Bpl_scaf_33810-1.19
Bpl_scaf_33810-1.21
Bpl_scaf_33810-1.22
Bpl_scaf_33810-1.25
Bpl_scaf_33810-1.26
Bpl_scaf_33810-1.28
Bpl_scaf_33810-1.3
Bpl_scaf_33818-0.0
Bpl_scaf_33820-0.11
Bpl_scaf_33820-1.2G PROTEIN-COUPLED RECEPTOR 157-RELATED
Bpl_scaf_33823-0.3RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1 RMI1
Bpl_scaf_33825-1.7
Bpl_scaf_33825-2.5
Bpl_scaf_33825-2.9
Bpl_scaf_33828-0.0MAJOR FACILITATOR SUPERFAMILY PROTEIN-RELATED
Bpl_scaf_33830-0.10
Bpl_scaf_33830-0.4
Bpl_scaf_33841-0.0BONUS, ISOFORM C-RELATED
Bpl_scaf_33841-0.12
Bpl_scaf_33841-0.13CORONIN
Bpl_scaf_33841-0.20
Bpl_scaf_33841-1.1MYOTUBULARIN-RELATED
Bpl_scaf_33841-2.10ALPHA-AMYLASE FAMILY MEMBER
Bpl_scaf_33841-2.11FATTY ACID BINDING PROTEIN
Bpl_scaf_33841-2.7CDC45-RELATED PROTEIN
Bpl_scaf_33842-0.3TOLL-LIKE RECEPTOR
Bpl_scaf_33847-0.0PUTATIVE-RELATED
Bpl_scaf_33855-0.4M-PHASE INDUCER PHOSPHATASE DUAL SPECIFICITY PHOSPHATASE CDC25
Bpl_scaf_33855-0.6DIHYDROFOLATE REDUCTASE
Bpl_scaf_33855-1.10G-PROTEIN COUPLED RECEPTOR 158-RELATED
Bpl_scaf_33855-1.17
Bpl_scaf_33855-2.10G-PROTEIN COUPLED RECEPTOR 158-RELATED
Bpl_scaf_33855-2.27ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN
Bpl_scaf_33855-2.4UNCHARACTERIZED
Bpl_scaf_33855-2.8EXOSOME COMPLEX EXONUCLEASE RIBOSOMAL RNA PROCESSING PROTEIN
Bpl_scaf_33855-2.9MRNA GUANINE-7- METHYLTRANSFERASE
Bpl_scaf_3386-0.5
Bpl_scaf_33866-2.8TNF RECEPTOR ASSOCIATED FACTOR
Bpl_scaf_33867-0.2
Bpl_scaf_33867-0.5
Bpl_scaf_33869-0.2
Bpl_scaf_3387-0.5ADIPOR/PROGESTIN RECEPTOR-RELATED
Bpl_scaf_3387-0.8IG-LIKE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_3387-1.13CADHERIN-23
Bpl_scaf_3387-1.14
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