About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_33454-0.28EPPIN
Bpl_scaf_33464-0.3E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED
Bpl_scaf_33464-0.8-
Bpl_scaf_33464-0.9HYDROXYSTEROID DEHYDROGENASE-LIKE PROTEIN 2
Bpl_scaf_33467-0.10
Bpl_scaf_33467-0.6
Bpl_scaf_33476-0.0IP13529P
Bpl_scaf_33486-0.2HEH2P
Bpl_scaf_3349-0.1
Bpl_scaf_33492-0.3EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN
Bpl_scaf_33508-0.0
Bpl_scaf_33508-0.11
Bpl_scaf_33532-0.5BONUS, ISOFORM C-RELATED
Bpl_scaf_33542-0.10
Bpl_scaf_33543-0.10SH3-BINDING
Bpl_scaf_33543-1.3DOCKING PROTEIN RELATED
Bpl_scaf_33543-2.12FERRITIN
Bpl_scaf_33543-2.4SMC5-SMC6 COMPLEX LOCALIZATION FACTOR 2
Bpl_scaf_33543-2.5FERRITIN
Bpl_scaf_33543-2.6FERRITIN
Bpl_scaf_33543-3.1
Bpl_scaf_33543-3.11HYPOXIA-INDUCBILE GENE 1 HIG1 -RELATED
Bpl_scaf_33543-3.15TESTICULAR HAPLOID EXPRESSED GENE PROTEIN
Bpl_scaf_33543-3.17
Bpl_scaf_33543-3.24HSPC111 PROTEIN-RELATED
Bpl_scaf_33543-5.0SGNH_HYDRO DOMAIN-CONTAINING PROTEIN
Bpl_scaf_33543-5.17PX DOMAIN-CONTAINING PROTEIN
Bpl_scaf_33543-5.18G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_33543-5.3
Bpl_scaf_33543-5.4ACROSIN-RELATED
Bpl_scaf_3356-0.7
Bpl_scaf_3356-0.8BONUS, ISOFORM C-RELATED
Bpl_scaf_3356-0.9
Bpl_scaf_33564-0.5
Bpl_scaf_33570-0.2
Bpl_scaf_33580-0.0
Bpl_scaf_33580-0.1
Bpl_scaf_33580-0.6RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Bpl_scaf_33591-0.0
Bpl_scaf_33591-0.6METALLOPEPTIDASE M28 FAMILY MEMBER
Bpl_scaf_33591-0.8DNA HELICASE RECQ FAMILY MEMBER
Bpl_scaf_33596-1.8IMPORTIN-7, 8, 11
Bpl_scaf_33596-1.9EGF-LIKE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_33596-10.18POLYAMINE-MODULATED FACTOR 1-BINDING PROTEIN 1-RELATED
Bpl_scaf_33596-11.3RAS-RESPONSIVE ELEMENT-BINDING PROTEIN 1
Bpl_scaf_33596-12.7-
Bpl_scaf_33596-13.7LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED
Bpl_scaf_33596-13.8FATTY ACID BINDING PROTEIN
Bpl_scaf_33596-13.9SI:CH211-266K22.6
Bpl_scaf_33596-14.4AAA DOMAIN-CONTAINING
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