About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_33064-1.21
Bpl_scaf_33064-1.5G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_33064-1.6G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_33070-0.19IGGFC_BINDING DOMAIN-CONTAINING PROTEIN
Bpl_scaf_33070-0.20IGGFC_BINDING DOMAIN-CONTAINING PROTEIN
Bpl_scaf_33070-0.21NEUROTRANSMITTER GATED ION CHANNEL
Bpl_scaf_33070-1.10VACUOLAR PROTEIN SORTING VPS16
Bpl_scaf_33070-1.15
Bpl_scaf_33070-1.17
Bpl_scaf_33070-1.18PIRIN-RELATED
Bpl_scaf_33074-0.1ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Bpl_scaf_33079-0.2
Bpl_scaf_33092-0.10RE40534P-RELATED
Bpl_scaf_33092-0.16RE40534P-RELATED
Bpl_scaf_33092-0.17ATM INTERACTOR
Bpl_scaf_33092-1.12
Bpl_scaf_33092-1.13POLY(A) RNA POLYMERASE
Bpl_scaf_33092-2.7
Bpl_scaf_33094-0.0
Bpl_scaf_33098-1.13SPERMATOGENESIS ASSOCIATED 11-RELATED
Bpl_scaf_33098-2.18CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 57
Bpl_scaf_33098-2.24
Bpl_scaf_33098-2.6RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR
Bpl_scaf_33105-0.0
Bpl_scaf_33108-0.1RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR
Bpl_scaf_33108-0.9
Bpl_scaf_33108-2.14TATA-BOX BINDING PROTEIN
Bpl_scaf_33108-2.24
Bpl_scaf_33119-1.20
Bpl_scaf_33119-1.23OS10G0105400 PROTEIN
Bpl_scaf_33119-1.31OS10G0105400 PROTEIN
Bpl_scaf_33119-2.33
Bpl_scaf_33119-2.34
Bpl_scaf_33119-2.36OS10G0105400 PROTEIN
Bpl_scaf_33119-2.37OS10G0105400 PROTEIN
Bpl_scaf_33128-0.4PHOSPHOLIPID SCRAMBLASE-RELATED
Bpl_scaf_33128-1.12ANKYRIN REPEAT-CONTAINING
Bpl_scaf_33128-1.16
Bpl_scaf_33128-2.15MOLTING PROTEIN MLT-4
Bpl_scaf_33128-2.23ANKYRIN REPEAT CONTAINING
Bpl_scaf_33128-2.24
Bpl_scaf_33128-2.25
Bpl_scaf_33128-2.28
Bpl_scaf_33128-2.31ATP-DEPENDENT DNA HELICASE
Bpl_scaf_33128-2.34ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED
Bpl_scaf_33128-2.68ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED
Bpl_scaf_33128-2.70
Bpl_scaf_33131-0.0FTP DOMAIN-CONTAINING PROTEIN
Bpl_scaf_33133-0.0
Bpl_scaf_33133-0.9
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