About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_32713-4.1
Bpl_scaf_32713-4.6THYMOCYTE NUCLEAR PROTEIN 1
Bpl_scaf_32713-4.7UNCHARACTERIZED
Bpl_scaf_32713-4.8THYMOCYTE NUCLEAR PROTEIN 1
Bpl_scaf_32713-5.10
Bpl_scaf_32713-5.13OTU DOMAIN CONTAINING PROTEIN
Bpl_scaf_32713-5.15
Bpl_scaf_3274-0.3
Bpl_scaf_3274-0.5CELL CYCLE CONTROL PROTEIN CWF22-RELATED
Bpl_scaf_32742-0.8
Bpl_scaf_32755-0.5
Bpl_scaf_32755-0.6SERINE/THREONINE-PROTEIN KINASE
Bpl_scaf_32769-0.0
Bpl_scaf_32781-0.10RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Bpl_scaf_32781-0.6SIMILAR TO RIKEN CDNA E130308A19
Bpl_scaf_32796-0.10
Bpl_scaf_32796-0.12NITRIC OXIDE SYNTHASE-RELATED
Bpl_scaf_32796-0.13
Bpl_scaf_32796-0.16PAIRED BOX PROTEIN PAX-6-RELATED-RELATED
Bpl_scaf_32796-0.18FAM11A, B PROTEIN
Bpl_scaf_32796-0.29DNA HELICASE RECQ FAMILY MEMBER
Bpl_scaf_32796-0.7
Bpl_scaf_32815-0.14MULTIPLE COAGULATION FACTOR DEFICIENCY PROTEIN 2 NEURAL STEM CELL DERIVED NEURONAL SURVIVAL PROTEIN
Bpl_scaf_32815-0.9MINA53 MYC INDUCED NUCLEAR ANTIGEN
Bpl_scaf_32818-0.5
Bpl_scaf_32818-0.6ADENYLATE CYCLASE TYPE 1
Bpl_scaf_32818-0.7
Bpl_scaf_32826-0.2
Bpl_scaf_32837-0.10MOLTING PROTEIN MLT-4
Bpl_scaf_32837-0.8
Bpl_scaf_3286-0.6BETA-1,4-GALACTOSYLTRANSFERASE
Bpl_scaf_3286-0.7ALPHA-L-FUCOSIDASE
Bpl_scaf_32867-0.2
Bpl_scaf_32876-0.10RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6
Bpl_scaf_32876-0.13GEO13361P1-RELATED
Bpl_scaf_32876-0.915-HYDROXYPROSTAGLANDIN DEHYDROGENASE [NAD(+)]
Bpl_scaf_32877-0.3
Bpl_scaf_32877-1.5
Bpl_scaf_32877-2.3T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAIN
Bpl_scaf_32877-2.4
Bpl_scaf_32877-2.6
Bpl_scaf_32877-3.3
Bpl_scaf_32877-4.2ZGC:174356
Bpl_scaf_32877-4.3
Bpl_scaf_32877-5.0
Bpl_scaf_32877-5.1
Bpl_scaf_32877-5.18
Bpl_scaf_32877-5.19FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
Bpl_scaf_32879-0.13SACSIN
Bpl_scaf_32879-0.7UNNAMED PRODUCT
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