About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_32879-0.8AMINOTRANSFERASE
Bpl_scaf_32895-0.0
Bpl_scaf_329-0.4EPH RECEPTOR A5
Bpl_scaf_329-0.5EPH RECEPTOR A5
Bpl_scaf_32918-0.0
Bpl_scaf_32918-0.5
Bpl_scaf_32932-0.9-
Bpl_scaf_32941-0.3
Bpl_scaf_32941-0.6G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_32941-0.7G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_32941-0.8
Bpl_scaf_32941-0.9
Bpl_scaf_32947-0.12
Bpl_scaf_32947-0.14
Bpl_scaf_32947-0.9
Bpl_scaf_3296-0.0
Bpl_scaf_3296-0.4
Bpl_scaf_32969-0.13BINDING OXIDOREDUCTASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G17690)-RELATED
Bpl_scaf_32969-0.14
Bpl_scaf_32969-0.6TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Bpl_scaf_32969-0.8
Bpl_scaf_32987-0.23ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Bpl_scaf_32987-0.24GEO13361P1-RELATED
Bpl_scaf_32987-0.26VACUOLAR ATP SYNTHASE SUBUNIT H
Bpl_scaf_32987-0.6PUTATIVE-RELATED
Bpl_scaf_32987-0.8
Bpl_scaf_32994-0.7PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_32994-0.8MYOSIN
Bpl_scaf_33004-0.4SORTING NEXIN-4
Bpl_scaf_33014-0.11
Bpl_scaf_33014-0.16POLYCYSTIN FAMILY MEMBER
Bpl_scaf_33014-0.17
Bpl_scaf_33015-0.13PROTEIN TORNADO 1
Bpl_scaf_33015-1.19WD REPEAT PROTEIN 26-RELATED
Bpl_scaf_33015-1.8
Bpl_scaf_33015-1.9
Bpl_scaf_33015-3.10NOVEL ZZ TYPE ZINC FINGER DOMAIN CONTAINING PROTEIN
Bpl_scaf_33015-4.8NOVEL ZZ TYPE ZINC FINGER DOMAIN CONTAINING PROTEIN
Bpl_scaf_33015-5.5SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 9C
Bpl_scaf_33015-6.4SERINE/THREONINE-PROTEIN KINASE LMTK1
Bpl_scaf_33015-7.11UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
Bpl_scaf_33015-7.12F14O23.11 PROTEIN
Bpl_scaf_33015-7.16GUANYL-NUCLEOTIDE EXCHANGE FACTOR
Bpl_scaf_33015-7.17
Bpl_scaf_33019-0.6
Bpl_scaf_33019-0.8
Bpl_scaf_33019-1.1
Bpl_scaf_33027-0.12
Bpl_scaf_33027-0.13IG-LIKE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_33027-0.14CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
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