About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_32538-8.22
Bpl_scaf_32538-9.3TYROSINE-PROTEIN KINASE RECEPTOR
Bpl_scaf_32539-0.4
Bpl_scaf_32539-0.9
Bpl_scaf_32540-0.3ANTIGEN MLAA-22-RELATED
Bpl_scaf_32541-0.0INHIBITOR OF APOPTOSIS
Bpl_scaf_32541-0.4
Bpl_scaf_32545-0.4METAXIN RELATED
Bpl_scaf_32549-0.13
Bpl_scaf_32549-1.10RHOMBOID-RELATED PROTEIN
Bpl_scaf_32549-1.18
Bpl_scaf_32549-1.7
Bpl_scaf_32549-1.8GLYCOSIDASE FAMILY 31
Bpl_scaf_32549-2.1RIBOSOMAL PROTEIN S7
Bpl_scaf_32549-3.23ZINC FINGER PROTEIN
Bpl_scaf_32549-3.26
Bpl_scaf_32549-3.49
Bpl_scaf_32549-3.5
Bpl_scaf_32549-3.50
Bpl_scaf_32549-3.54QUIESCIN Q6-RELATED SULFHYDRYL OXIDASE
Bpl_scaf_32549-3.55
Bpl_scaf_32550-0.5VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
Bpl_scaf_32559-0.18ZGC:195170
Bpl_scaf_32559-0.6SI:CH211-108C17.2-RELATED-RELATED
Bpl_scaf_32559-0.8AGAP005574-PA
Bpl_scaf_3256-0.5BTB/POZ DOMAIN-CONTAINING
Bpl_scaf_3256-0.7BTB/POZ DOMAIN-CONTAINING
Bpl_scaf_32611-0.0
Bpl_scaf_32611-0.9PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_32638-0.2
Bpl_scaf_32638-0.5
Bpl_scaf_32645-0.5PROTEIN SIDEKICK
Bpl_scaf_32660-0.4AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
Bpl_scaf_32660-0.5
Bpl_scaf_32672-0.0
Bpl_scaf_32686-0.10
Bpl_scaf_32686-0.8EXPRESSED PROTEIN
Bpl_scaf_32686-0.9
Bpl_scaf_32691-0.5DNA2/NAM7 HELICASE FAMILY
Bpl_scaf_32698-0.3EGALITARIAN, ISOFORM B
Bpl_scaf_32704-0.10
Bpl_scaf_32704-0.11
Bpl_scaf_32704-0.12
Bpl_scaf_32712-0.4DUF3504 DOMAIN-CONTAINING PROTEIN
Bpl_scaf_32713-0.6HIKESHI FAMILY MEMBER
Bpl_scaf_32713-1.3PROTEIN FAM199X
Bpl_scaf_32713-2.0
Bpl_scaf_32713-2.4UV EXCISION REPAIR PROTEIN RAD23
Bpl_scaf_32713-2.9MICROFIBRIL-ASSOCIATED GLYCOPROTEIN 3
Bpl_scaf_32713-3.1RAS-LIKE FAMILY MEMBER 11
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