About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_3221-0.8
Bpl_scaf_32214-0.12STAGA COMPLEX 65 SUBUNIT GAMMA
Bpl_scaf_32214-0.2
Bpl_scaf_32214-0.3
Bpl_scaf_32214-0.5BONUS, ISOFORM C-RELATED
Bpl_scaf_3222-0.1
Bpl_scaf_3222-0.3ACTIN
Bpl_scaf_3222-0.8ACTIN
Bpl_scaf_3222-1.3
Bpl_scaf_3222-1.5NEUROTRANSMITTER GATED ION CHANNEL
Bpl_scaf_3222-1.9LEUCINE RICH REPEAT FAMILY PROTEIN
Bpl_scaf_3222-2.5BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
Bpl_scaf_3222-2.8ALPHA-AMYLASE
Bpl_scaf_3222-3.11
Bpl_scaf_3222-3.3ALPHA-AMYLASE
Bpl_scaf_3222-3.5
Bpl_scaf_3222-3.9LEUCINE RICH REPEAT FAMILY PROTEIN
Bpl_scaf_3222-4.11PRE-MRNA CLEAVAGE COMPLEX II
Bpl_scaf_3222-4.12-
Bpl_scaf_3222-4.18APOPTOGENIC PROTEIN 1, MITOCHONDRIAL
Bpl_scaf_32225-0.15CEREBELLIN-RELATED
Bpl_scaf_32225-0.23CEREBELLIN-RELATED
Bpl_scaf_32225-0.24LITHOSTATHINE
Bpl_scaf_32225-0.4
Bpl_scaf_32225-0.5
Bpl_scaf_32225-0.9CEREBELLIN-RELATED
Bpl_scaf_32239-0.11UNCHARACTERIZED
Bpl_scaf_32239-0.12
Bpl_scaf_32239-0.6
Bpl_scaf_32250-0.13
Bpl_scaf_32250-0.14
Bpl_scaf_32250-0.16PUTATIVE-RELATED
Bpl_scaf_32250-0.18
Bpl_scaf_32250-0.5
Bpl_scaf_32250-0.6
Bpl_scaf_32263-0.10
Bpl_scaf_32263-0.2REVERSE TRANSCRIPTASES
Bpl_scaf_32263-0.8HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_32287-1.5
Bpl_scaf_32295-0.34PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Bpl_scaf_32295-0.35PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Bpl_scaf_32295-0.36PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Bpl_scaf_32295-1.10PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Bpl_scaf_32295-1.26PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Bpl_scaf_32295-1.27PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Bpl_scaf_32300-0.0
Bpl_scaf_32300-0.10CYTOKINESIS PROTEIN 3
Bpl_scaf_32300-0.11LEUCINE RICH REPEAT FAMILY PROTEIN
Bpl_scaf_32300-0.3
Bpl_scaf_32300-1.11INHIBITOR OF APOPTOSIS
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