About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_31802-1.2
Bpl_scaf_31802-2.10
Bpl_scaf_31802-2.5KRAB AND ZINC FINGER DOMAIN-CONTAINING
Bpl_scaf_31802-2.9TRANSAMIDASE
Bpl_scaf_31802-3.8UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
Bpl_scaf_31802-3.9
Bpl_scaf_31803-0.0CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Bpl_scaf_31811-0.0
Bpl_scaf_31813-1.14CHITIN SYNTHASE
Bpl_scaf_31813-2.15THIOREDOXIN-LIKE PROTEIN 1
Bpl_scaf_31813-2.16CHITIN SYNTHASE
Bpl_scaf_31813-2.9
Bpl_scaf_31813-3.12BTB/POZ DOMAIN-CONTAINING
Bpl_scaf_31813-3.16BTB/POZ DOMAIN-CONTAINING
Bpl_scaf_31813-3.2BTB/POZ DOMAIN-CONTAINING
Bpl_scaf_31813-3.20BTB/POZ DOMAIN-CONTAINING
Bpl_scaf_31813-3.21BTB/POZ DOMAIN-CONTAINING
Bpl_scaf_31813-3.23BTB/POZ DOMAIN-CONTAINING
Bpl_scaf_31813-3.4BTB/POZ DOMAIN-CONTAINING
Bpl_scaf_31818-0.2
Bpl_scaf_31818-0.5
Bpl_scaf_31818-0.6EGF-LIKE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_31818-0.8ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN
Bpl_scaf_31818-1.2FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Bpl_scaf_31818-1.24FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Bpl_scaf_31818-1.25
Bpl_scaf_31818-1.26ALANINE AMINOTRANSFERASE
Bpl_scaf_31818-2.8VISUAL SYSTEM HOMEOBOX 2
Bpl_scaf_31818-2.9TRIOKINASE/FMN CYCLASE
Bpl_scaf_31818-3.11F-BOX ONLY PROTEIN 4
Bpl_scaf_31818-3.16IMPORTIN-7, 8, 11
Bpl_scaf_31818-3.17HEPARANASE
Bpl_scaf_31818-3.3
Bpl_scaf_31818-3.33NUDIX HYDROLASE, NUDC SUBFAMILY
Bpl_scaf_31818-3.34KELCH DOMAIN-CONTAINING PROTEIN
Bpl_scaf_31818-3.7
Bpl_scaf_31820-0.4
Bpl_scaf_31820-0.5TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Bpl_scaf_31821-0.4
Bpl_scaf_31823-0.2NG5
Bpl_scaf_31827-0.18
Bpl_scaf_31827-0.4
Bpl_scaf_31827-0.6
Bpl_scaf_31827-0.7
Bpl_scaf_31827-1.5
Bpl_scaf_31827-2.2REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_31827-3.2
Bpl_scaf_31827-3.7CEREBELLIN-RELATED
Bpl_scaf_31827-4.2
Bpl_scaf_31827-4.7
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