About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_31485-0.3
Bpl_scaf_31485-0.5
Bpl_scaf_3149-0.7
Bpl_scaf_3149-0.8
Bpl_scaf_31497-0.12CUBILIN-LIKE PROTEIN
Bpl_scaf_31497-0.7TOLL-LIKE RECEPTOR
Bpl_scaf_31497-0.8TOLL-LIKE RECEPTOR
Bpl_scaf_31497-0.9TOLL-LIKE RECEPTOR
Bpl_scaf_315-0.2
Bpl_scaf_315-0.3CYTOCHROME P450 FAMILY 4
Bpl_scaf_3150-0.12D-DOPACHROME DECARBOXYLASE
Bpl_scaf_3150-0.13GTP-BINDING PROTEIN HFLX
Bpl_scaf_3150-2.11MIP11318P
Bpl_scaf_3150-2.14LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATED
Bpl_scaf_3150-2.19VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
Bpl_scaf_3150-2.31TEKTIN
Bpl_scaf_3150-2.34HOMEOBOX PROTEIN ARISTALESS
Bpl_scaf_3150-3.0INTERFERON-INDUCIBLE GTPASE
Bpl_scaf_3150-3.10MOLTING PROTEIN MLT-4
Bpl_scaf_3150-3.17DOLICHYL GLYCOSYLTRANSFERASE
Bpl_scaf_3150-3.26ER DEGRADATION-ENHANCING ALPHA-MANNOSIDASE-LIKE PROTEIN 2
Bpl_scaf_3150-3.2840S RIBOSOMAL PROTEIN S10
Bpl_scaf_3150-3.29ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_31501-0.5SOLUTE CARRIER FAMILY 22 MEMBER
Bpl_scaf_31501-0.6DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
Bpl_scaf_31501-10.8SPONDIN
Bpl_scaf_31501-11.10LANC-LIKE PROTEIN
Bpl_scaf_31501-11.19NADH DEHYDROGENASE (UBIQUINONE) 1 BETA SUBCOMPLEX, 4
Bpl_scaf_31501-11.6SPINAL CORD EXPRESSION PROTEIN 4
Bpl_scaf_31501-11.8MACOILIN
Bpl_scaf_31501-12.11G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_31501-12.8EXPORTIN 4,7-RELATED
Bpl_scaf_31501-12.9CHAPERONIN
Bpl_scaf_31501-13.1
Bpl_scaf_31501-13.11T-BOX PROTEIN-RELATED
Bpl_scaf_31501-13.2
Bpl_scaf_31501-13.4
Bpl_scaf_31501-13.40
Bpl_scaf_31501-13.5
Bpl_scaf_31501-14.11DPY-19-LIKE 1, LIKE (H. SAPIENS)
Bpl_scaf_31501-14.12PROTEIN FAM221A-RELATED
Bpl_scaf_31501-15.9PROTEIN SON
Bpl_scaf_31501-17.1DYNEIN HEAVY CHAIN
Bpl_scaf_31501-17.11TRANSMEMBRANE PROTEIN 9 FAMILY MEMBER
Bpl_scaf_31501-17.22
Bpl_scaf_31501-17.28DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN
Bpl_scaf_31501-17.30DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN
Bpl_scaf_31501-17.31DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN
Bpl_scaf_31501-17.32CYCLIC AMP RESPONSE ELEMENT-BINDING PROTEIN A
Bpl_scaf_31501-17.5DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN
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