About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_31349-5.41FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Bpl_scaf_31349-5.42FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Bpl_scaf_3135-0.3CYSTEINE-RICH SECRETORY PROTEIN-RELATED
Bpl_scaf_31356-0.1SCAVENGER RECEPTOR CLASS F
Bpl_scaf_31365-0.0
Bpl_scaf_31365-0.15
Bpl_scaf_3137-0.2NADH-UBIQUINONE OXIDOREDUCTASE FLAVOPROTEIN 1 NDUFV1
Bpl_scaf_31390-0.8
Bpl_scaf_31408-0.14DENTIN MATRIX PROTEIN 4 PROTEIN FAM20
Bpl_scaf_31408-0.16MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Bpl_scaf_31408-0.17NG37
Bpl_scaf_31408-0.21MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Bpl_scaf_3141-0.11MANNOSE-6-PHOSPHATE ISOMERASE
Bpl_scaf_3141-0.7MANNOSE-6-PHOSPHATE ISOMERASE
Bpl_scaf_3141-0.8UNCHARACTERIZED HYPOTHALAMUS PROTEIN HT007
Bpl_scaf_3141-2.11ECTO-NOX DISULFIDE-THIOL EXCHANGER
Bpl_scaf_3141-2.21DISCS LARGE
Bpl_scaf_3141-2.22DISCS LARGE
Bpl_scaf_3141-2.9CENTROMERE PROTEIN I
Bpl_scaf_3141-3.2-
Bpl_scaf_3141-3.3HL07962P-RELATED
Bpl_scaf_3141-3.4
Bpl_scaf_31415-0.13
Bpl_scaf_31415-0.15CADHERIN-87A
Bpl_scaf_31425-0.10PEROXISOMAL MEMBRANE PROTEIN 4
Bpl_scaf_31425-0.12
Bpl_scaf_31425-0.15
Bpl_scaf_31425-0.9
Bpl_scaf_3143-0.2
Bpl_scaf_31435-0.0
Bpl_scaf_31435-0.1L1 TRANSPOSABLE ELEMENT-RELATED
Bpl_scaf_3144-0.0
Bpl_scaf_31444-0.0BONUS, ISOFORM C-RELATED
Bpl_scaf_31444-0.10PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17
Bpl_scaf_31444-0.2BONUS, ISOFORM C-RELATED
Bpl_scaf_31444-0.4ZINC FINGER PROTEIN
Bpl_scaf_31444-0.5INTEGRAL MEMBRANE PROTEIN DGCR2/IDD
Bpl_scaf_31444-0.8ZINC FINGER PROTEIN
Bpl_scaf_31458-0.1
Bpl_scaf_31458-0.7
Bpl_scaf_3146-0.10IG-LIKE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_31470-0.11GLYCEROL-3-PHOSPHATE DEHYDROGENASE
Bpl_scaf_31470-0.12UBX DOMAIN-CONTAINING PROTEIN 4
Bpl_scaf_31470-0.13TRANSMEMBRANE PROTEIN
Bpl_scaf_31475-0.11
Bpl_scaf_31475-0.17INHIBITOR OF APOPTOSIS
Bpl_scaf_31475-0.2
Bpl_scaf_31475-0.24
Bpl_scaf_31475-0.25
Bpl_scaf_31485-0.0
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