About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_30786-3.6PROTEIN PHOSPHATASE 2C
Bpl_scaf_30786-4.11ZNF44 PROTEIN
Bpl_scaf_30786-4.9
Bpl_scaf_30786-5.2KINESIN-RELATED
Bpl_scaf_30786-6.11
Bpl_scaf_30786-6.14
Bpl_scaf_30786-6.15
Bpl_scaf_30786-6.6
Bpl_scaf_30792-0.16PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Bpl_scaf_30792-0.18PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Bpl_scaf_30792-0.52PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Bpl_scaf_30792-0.56PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Bpl_scaf_30792-0.6MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Bpl_scaf_30809-0.3
Bpl_scaf_30809-0.4HEAT SHOCK PROTEIN HSP-12.2-RELATED
Bpl_scaf_30809-0.6OTU DEUBIQUITINASE WITH LINEAR LINKAGE-SPECIFICITY A-RELATED
Bpl_scaf_30818-0.2
Bpl_scaf_30818-0.3
Bpl_scaf_30818-0.4
Bpl_scaf_30818-0.5
Bpl_scaf_30818-0.7
Bpl_scaf_30818-0.8
Bpl_scaf_30829-0.17RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Bpl_scaf_30829-0.19
Bpl_scaf_30831-0.2
Bpl_scaf_30837-0.0
Bpl_scaf_30837-0.1
Bpl_scaf_30837-0.10
Bpl_scaf_30837-0.11CBP/P300-RELATED
Bpl_scaf_30838-1.19TYROSINASE FAMILY MEMBER
Bpl_scaf_30838-1.20CROSSVEINLESS 2
Bpl_scaf_30838-1.22CROSSVEINLESS 2
Bpl_scaf_30838-2.6
Bpl_scaf_30838-2.7ASSOCIATE OF C-MYC AMY-1
Bpl_scaf_30838-4.16SERINE/THREONINE-PROTEIN KINASE ATM
Bpl_scaf_30838-4.17SERINE/THREONINE-PROTEIN KINASE ATM
Bpl_scaf_30838-4.18SERINE/THREONINE-PROTEIN KINASE ATM
Bpl_scaf_30838-4.3
Bpl_scaf_30838-5.5
Bpl_scaf_30838-6.11BONUS, ISOFORM C-RELATED
Bpl_scaf_30838-6.6BONUS, ISOFORM C-RELATED
Bpl_scaf_30839-0.15
Bpl_scaf_30839-0.2OSJNBA0004B13.7 PROTEIN
Bpl_scaf_30839-0.3OSJNBA0004B13.7 PROTEIN
Bpl_scaf_30846-0.11WD REPEAT-CONTAINING PROTEIN 75
Bpl_scaf_30846-0.12
Bpl_scaf_30846-0.9ZINC FINGER PROTEIN ZIC AND GLI
Bpl_scaf_30860-0.15ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED
Bpl_scaf_30860-0.16TEX2 PROTEIN-RELATED
Bpl_scaf_30860-0.17ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 1
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