About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_30206-0.5
Bpl_scaf_30206-0.9
Bpl_scaf_30206-1.17
Bpl_scaf_30206-1.19
Bpl_scaf_30206-1.20
Bpl_scaf_30206-1.21
Bpl_scaf_30206-1.22
Bpl_scaf_30206-1.23
Bpl_scaf_30206-1.3
Bpl_scaf_30210-0.23TUBULIN
Bpl_scaf_30211-0.3MPS ONE BINDER KINASE ACTIVATOR-LIKE MOB
Bpl_scaf_30211-1.10TRYPSIN-RELATED
Bpl_scaf_30230-1.8
Bpl_scaf_30230-1.9
Bpl_scaf_30234-0.0
Bpl_scaf_30238-0.0
Bpl_scaf_30238-0.1
Bpl_scaf_30239-1.0
Bpl_scaf_30243-0.0CEREBELLIN-RELATED
Bpl_scaf_30249-0.11INTERFERON-INDUCIBLE GTPASE
Bpl_scaf_30249-1.0
Bpl_scaf_30249-1.1
Bpl_scaf_30249-1.12INTERFERON-INDUCIBLE GTPASE
Bpl_scaf_30249-1.16
Bpl_scaf_30249-1.2
Bpl_scaf_30249-2.0
Bpl_scaf_30249-2.11LITHOSTATHINE
Bpl_scaf_30249-2.2
Bpl_scaf_30249-2.7
Bpl_scaf_30249-2.8
Bpl_scaf_30255-0.0TOLL-LIKE RECEPTOR
Bpl_scaf_30257-0.1GLYCOPROTEIN HORMONE RECEPTOR
Bpl_scaf_30259-0.0
Bpl_scaf_30260-1.1UNCHARACTERIZED
Bpl_scaf_30260-2.17
Bpl_scaf_30260-2.18ALDO/KETO REDUCTASE
Bpl_scaf_30260-2.3260S RIBOSOMAL PROTEIN L12
Bpl_scaf_30260-2.33CGI-141-RELATED/LIPASE CONTAINING PROTEIN
Bpl_scaf_30260-2.8METAXIN RELATED
Bpl_scaf_30261-0.6
Bpl_scaf_30264-0.3SOLUTE CARRIER FAMILY 39
Bpl_scaf_30264-1.10NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED
Bpl_scaf_30264-1.11DED DOMAIN-CONTAINING PROTEIN
Bpl_scaf_30264-1.9PROTEIN/NUCLEIC ACID DEGLYCASE DJ-1-RELATED
Bpl_scaf_30264-2.21NEUROTRANSMITTER GATED ION CHANNEL
Bpl_scaf_30264-2.22NEUROTRANSMITTER GATED ION CHANNEL
Bpl_scaf_30264-2.9NEUROTRANSMITTER GATED ION CHANNEL
Bpl_scaf_30266-0.0
Bpl_scaf_30270-0.2
Bpl_scaf_30271-0.3
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