About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_30121-0.1
Bpl_scaf_30121-0.11
Bpl_scaf_30121-0.14
Bpl_scaf_30121-0.8TYROSINE-PROTEIN KINASE RECEPTOR
Bpl_scaf_30132-0.1BONUS, ISOFORM C-RELATED
Bpl_scaf_30132-0.2G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_30132-0.26
Bpl_scaf_30132-0.6
Bpl_scaf_30138-0.5BONUS, ISOFORM C-RELATED
Bpl_scaf_30146-0.1
Bpl_scaf_30147-0.5CCHC-TYPE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_30147-0.6
Bpl_scaf_30147-1.3VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL
Bpl_scaf_30147-2.1
Bpl_scaf_30147-4.13FERROCHELATASE
Bpl_scaf_30147-4.14PROPIONYL-COA CARBOXYLASE BETA CHAIN
Bpl_scaf_30147-4.15
Bpl_scaf_30147-4.7
Bpl_scaf_30147-5.10MYOSIN VII, XV
Bpl_scaf_30147-6.44
Bpl_scaf_30147-6.46
Bpl_scaf_30147-6.53MACROGLOBULIN / COMPLEMENT
Bpl_scaf_30147-6.54MACROGLOBULIN / COMPLEMENT
Bpl_scaf_30147-6.62
Bpl_scaf_30147-6.64MACROGLOBULIN / COMPLEMENT
Bpl_scaf_30147-6.66MACROGLOBULIN / COMPLEMENT
Bpl_scaf_30149-0.15THREE PRIME REPAIR EXONUCLEASE 1, 2
Bpl_scaf_30149-0.2
Bpl_scaf_30157-0.3METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE
Bpl_scaf_30157-0.8SYNAPTOTAGMIN
Bpl_scaf_30157-0.95'-NUCLEOTIDASE-RELATED
Bpl_scaf_30166-0.12
Bpl_scaf_30166-0.16TYPE I INOSITOL-1,4,5-TRISPHOSPHATE 5-PHOSPHATASE
Bpl_scaf_30166-0.18
Bpl_scaf_30166-0.8
Bpl_scaf_30172-0.10OSJNBA0004B13.7 PROTEIN
Bpl_scaf_30172-0.17
Bpl_scaf_30172-0.8
Bpl_scaf_30173-0.10BETA1,3-GALACTOSYLTRANSFERASE
Bpl_scaf_30173-0.9
Bpl_scaf_30173-1.3PDF RECEPTOR-LIKE PROTEIN-RELATED
Bpl_scaf_30173-2.13G-PROTEIN COUPLED RECEPTOR FAMILY 1 MEMBER
Bpl_scaf_30173-2.14
Bpl_scaf_30173-3.6
Bpl_scaf_30173-3.7APG9 AUTOPHAGY 9
Bpl_scaf_30173-4.1GALACTOSE-3-O-SULFOTRANSFERASE
Bpl_scaf_30173-4.13UNCHARACTERIZED
Bpl_scaf_30173-5.4ACETYLCHOLINESTERASE
Bpl_scaf_30173-6.11STRAWBERRY NOTCH-RELATED
Bpl_scaf_30173-6.12TRANSPOSABLE ELEMENT-RELATED
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