About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_2982-4.36ADIPOR/PROGESTIN RECEPTOR-RELATED
Bpl_scaf_2982-4.6
Bpl_scaf_2982-5.10
Bpl_scaf_2982-5.2
Bpl_scaf_2982-5.7SYNAPTOGYRIN
Bpl_scaf_2982-5.8ZINC FINGER PROTEIN 598
Bpl_scaf_2982-6.6TRANSIENT RECEPTOR POTENTIAL CHANNEL
Bpl_scaf_2982-7.0HISTONE H1
Bpl_scaf_2982-7.1ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_2982-7.11
Bpl_scaf_2982-8.5CYTOCHROME B-245 CHAPERONE 1
Bpl_scaf_2982-8.6GALACTOCEREBROSIDASE
Bpl_scaf_2982-9.14UBIQUITIN CONJUGATING ENZYME 7 INTERACTING PROTEIN-RELATED
Bpl_scaf_2982-9.15
Bpl_scaf_2982-9.16UNCHARACTERIZED
Bpl_scaf_2982-9.22CASPASE
Bpl_scaf_2982-9.3
Bpl_scaf_29824-0.1SELENIDE, WATER DIKINASE
Bpl_scaf_29847-0.13
Bpl_scaf_29847-0.14
Bpl_scaf_2985-0.2-
Bpl_scaf_2987-0.1DEATH DOMAIN-CONTAINING PROTEIN CRADD
Bpl_scaf_29876-0.4LIPOXYGENASE
Bpl_scaf_29891-0.0
Bpl_scaf_29891-0.1
Bpl_scaf_29891-0.4
Bpl_scaf_29900-0.6EPH RECEPTOR A5
Bpl_scaf_29900-0.9
Bpl_scaf_2991-0.6
Bpl_scaf_2991-0.7
Bpl_scaf_2991-1.17
Bpl_scaf_2991-1.5
Bpl_scaf_2991-1.6SLR1189 PROTEIN
Bpl_scaf_2991-2.1
Bpl_scaf_2991-2.2BONUS, ISOFORM C-RELATED
Bpl_scaf_2991-2.33
Bpl_scaf_2991-2.34UNCHARACTERIZED
Bpl_scaf_2991-2.4
Bpl_scaf_2991-2.5
Bpl_scaf_29910-0.12KINESIN-LIKE PROTEIN KIN-12D
Bpl_scaf_29910-0.14
Bpl_scaf_29910-0.15INNER MEMBRANE PROTEIN, PROBABLE PERMEASE
Bpl_scaf_29918-0.0
Bpl_scaf_29918-0.1
Bpl_scaf_29932-0.0
Bpl_scaf_29932-0.1
Bpl_scaf_29942-0.1
Bpl_scaf_29942-0.6UDP-GLUCOSE 4-EPIMERASE
Bpl_scaf_29942-0.7PROTEIN C20ORF43 HOMOLOG
Bpl_scaf_29957-0.2TRANSPOSABLE ELEMENT-RELATED
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