About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_29674-11.1
Bpl_scaf_29674-11.26HOMEOBOX PROTEIN CDX
Bpl_scaf_29674-11.27GS HOMEOBOX 2
Bpl_scaf_29674-2.0
Bpl_scaf_29674-2.7PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR
Bpl_scaf_29674-2.8PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR
Bpl_scaf_29674-3.2
Bpl_scaf_29674-3.7AMMONIUM TRANSPORTER
Bpl_scaf_29674-4.6HEADCASE PROTEIN
Bpl_scaf_29674-4.8ALDEHYDE DEHYDROGENASE-RELATED
Bpl_scaf_29674-4.9TAXILIN
Bpl_scaf_29674-6.0CEREBELLIN-RELATED
Bpl_scaf_29674-7.1
Bpl_scaf_29674-7.4SULFOTRANSFERASE SULT
Bpl_scaf_29674-8.4TOLL-LIKE RECEPTOR
Bpl_scaf_29674-8.8CARBOHYDRATE BINDING DOMAIN CONTAINING PROTEIN
Bpl_scaf_29674-8.9CYANOPHYCINASE
Bpl_scaf_29674-9.13MACROGLOBULIN / COMPLEMENT
Bpl_scaf_29674-9.15TOLL-LIKE RECEPTOR
Bpl_scaf_29674-9.17
Bpl_scaf_29677-0.1SIMILAR TO RIKEN CDNA E130308A19
Bpl_scaf_29677-0.6D-RIBITOL-5-PHOSPHATE CYTIDYLYLTRANSFERASE
Bpl_scaf_29679-0.0PROTEIN STAR
Bpl_scaf_29685-0.0
Bpl_scaf_29685-0.4
Bpl_scaf_29685-0.7
Bpl_scaf_29685-1.0
Bpl_scaf_29685-1.1
Bpl_scaf_29685-1.17BETA-1,4-GALACTOSYLTRANSFERASE
Bpl_scaf_29685-1.4
Bpl_scaf_29685-3.0
Bpl_scaf_29685-3.7RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Bpl_scaf_29687-0.2
Bpl_scaf_29688-0.0APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.
Bpl_scaf_29694-0.4
Bpl_scaf_29696-0.2NEUROTRANSMITTER GATED ION CHANNEL
Bpl_scaf_29696-1.2TOLL-LIKE RECEPTOR
Bpl_scaf_29696-1.23
Bpl_scaf_29696-1.4TOLL-LIKE RECEPTOR
Bpl_scaf_29696-1.7
Bpl_scaf_29696-2.1ZINC/IRON TRANSPORTER
Bpl_scaf_29696-2.2
Bpl_scaf_29696-2.3
Bpl_scaf_29696-3.13
Bpl_scaf_29696-3.9TRICHOPLEIN KERATIN FILAMENT-BINDING PROTEIN FAMILY MEMBER
Bpl_scaf_29698-0.1G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_29698-0.2G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_29699-0.3
Bpl_scaf_2970-0.0
Bpl_scaf_29701-0.3OS10G0105400 PROTEIN
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