About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_30434-0.1
Bpl_scaf_30455-0.3
Bpl_scaf_30455-0.8
Bpl_scaf_30461-0.1OS01G0282866 PROTEIN
Bpl_scaf_30471-0.41-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE
Bpl_scaf_30472-0.0
Bpl_scaf_30472-0.3ALPHA-L-IDURONIDASE
Bpl_scaf_30472-0.5TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN
Bpl_scaf_30472-2.3GRB10 INTERACTING GYF PROTEIN
Bpl_scaf_30472-3.15PIKACHURIN-LIKE PROTEIN
Bpl_scaf_30472-3.16NETRIN/LAMININ-RELATED
Bpl_scaf_30472-4.1
Bpl_scaf_30472-4.10DELTEX-RELATED
Bpl_scaf_30472-4.7
Bpl_scaf_30472-4.9RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Bpl_scaf_30474-0.8CYTOCHROME P450 FAMILY 4
Bpl_scaf_30485-0.0
Bpl_scaf_30485-0.1LITHOSTATHINE
Bpl_scaf_30485-0.2
Bpl_scaf_30485-0.4
Bpl_scaf_30485-1.10
Bpl_scaf_30485-1.5CARBOHYDRATE SULFOTRANSFERASE
Bpl_scaf_30485-1.9CRUMBS FAMILY MEMBER
Bpl_scaf_30485-2.11
Bpl_scaf_30485-2.13FMRFAMIDE RECEPTOR-RELATED
Bpl_scaf_30485-2.49CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2
Bpl_scaf_30495-0.0
Bpl_scaf_30503-0.4AUTOCRINE PROLIFERATION REPRESSOR PROTEIN A
Bpl_scaf_30514-0.0VOLTAGE-GATED POTASSIUM CHANNEL
Bpl_scaf_30531-0.4
Bpl_scaf_30531-0.5
Bpl_scaf_30575-0.0
Bpl_scaf_30575-0.1
Bpl_scaf_30584-0.0
Bpl_scaf_30584-0.10
Bpl_scaf_30584-0.2
Bpl_scaf_30584-0.6
Bpl_scaf_30599-0.2
Bpl_scaf_30599-0.5C-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 180
Bpl_scaf_30599-0.6MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Bpl_scaf_30609-0.4INTERFERON-INDUCIBLE GTPASE
Bpl_scaf_30628-0.2
Bpl_scaf_30638-0.0THREE PRIME REPAIR EXONUCLEASE 1, 2
Bpl_scaf_30639-0.2SCAVENGER RECEPTOR CLASS F
Bpl_scaf_30639-1.5SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS
Bpl_scaf_30639-2.17FATTY ACID ACYL TRANSFERASE-RELATED
Bpl_scaf_30639-2.19FATTY ACID ACYL TRANSFERASE-RELATED
Bpl_scaf_30639-3.1UNCHARACTERIZED
Bpl_scaf_30639-5.14CDK5 AND ABL1 ENZYME SUBSTRATE 1
Bpl_scaf_30639-5.15CDK5 AND ABL1 ENZYME SUBSTRATE 1
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