About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_30860-0.19
Bpl_scaf_30860-0.25DILUTE DOMAIN-CONTAINING PROTEIN YPR089W
Bpl_scaf_30876-0.0
Bpl_scaf_30876-0.21SCAVENGER RECEPTOR CLASS F
Bpl_scaf_30876-0.22
Bpl_scaf_30876-0.23G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_30876-0.8
Bpl_scaf_30889-0.6
Bpl_scaf_30889-0.7MOLTING PROTEIN MLT-4
Bpl_scaf_30889-1.11
Bpl_scaf_30889-1.17NADPH OXIDASE
Bpl_scaf_30889-1.9
Bpl_scaf_30912-0.0
Bpl_scaf_30913-0.4CYSTEINE PROTEASE FAMILY C1-RELATED
Bpl_scaf_30914-0.26
Bpl_scaf_30914-0.27
Bpl_scaf_30914-1.14
Bpl_scaf_30925-0.0DUF3504 DOMAIN-CONTAINING PROTEIN
Bpl_scaf_30925-0.10
Bpl_scaf_30925-0.13PARAOXONASE
Bpl_scaf_30925-0.8PARAOXONASE
Bpl_scaf_30925-1.11DOPEY-RELATED
Bpl_scaf_30925-1.15UNCHARACTERIZED
Bpl_scaf_30925-1.2
Bpl_scaf_30925-1.21POLYCOMB PROTEIN
Bpl_scaf_30925-1.22
Bpl_scaf_30931-0.9GRANULIN
Bpl_scaf_30933-0.6
Bpl_scaf_30933-1.0
Bpl_scaf_30943-0.4
Bpl_scaf_30948-0.1
Bpl_scaf_30948-0.3
Bpl_scaf_30953-0.0ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Bpl_scaf_30962-0.3-
Bpl_scaf_30962-1.0
Bpl_scaf_30962-1.2PUTATIVE-RELATED
Bpl_scaf_30962-2.14GLUTAREDOXIN-1
Bpl_scaf_30962-2.7PROCOLLAGEN-LYSINE,2-OXOGLUTARATE 5-DIOXYGENASE/GLYCOSYLTRANSFERASE 25 FAMILY MEMBER
Bpl_scaf_30963-0.0
Bpl_scaf_30969-0.4MCT-1 PROTEIN
Bpl_scaf_30969-1.1L1 TRANSPOSABLE ELEMENT-RELATED
Bpl_scaf_30969-1.5JM1 PROTEIN
Bpl_scaf_30969-1.6ZINC FINGER PROTEIN
Bpl_scaf_30969-2.13DUF3504 DOMAIN-CONTAINING PROTEIN
Bpl_scaf_30969-2.16DELTEX-RELATED
Bpl_scaf_30969-2.8SODIUM CHANNEL AND CLATHRIN LINKER 1
Bpl_scaf_30975-0.0
Bpl_scaf_30977-1.3OXIDASE/PEROXIDASE
Bpl_scaf_30977-2.7
Bpl_scaf_30977-2.8TNF RECEPTOR ASSOCIATED FACTOR
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