About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides53318REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides53319-
Paelopatides53320-
Paelopatides53321PROTEIN CBG26694
Paelopatides53322NEPHRIN
Paelopatides53323PIKACHURIN-LIKE PROTEIN
Paelopatides53324FI04643P-RELATED
Paelopatides53325FI04643P-RELATED
Paelopatides53326INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides53327ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides53328-
Paelopatides53329FI04643P-RELATED
Paelopatides5333030S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18
Paelopatides53331VHS DOMAIN CONTAINING PROTEIN FAMILY
Paelopatides53332-
Paelopatides53333VHS DOMAIN CONTAINING PROTEIN FAMILY
Paelopatides53334-
Paelopatides53335ALDEHYDE DEHYDROGENASE-RELATED
Paelopatides53336-
Paelopatides53337-
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