About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides5327852 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides53279ENZYMATIC POLYPROTEIN-RELATED
Paelopatides53280-
Paelopatides53281-
Paelopatides53282PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides53283-
Paelopatides53284TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides53285RIBOSOMAL PROTEIN L7AE FAMILY MEMBER
Paelopatides53286ANKYRIN REPEAT DOMAIN 40
Paelopatides53287-
Paelopatides53288REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides53289PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides53290-
Paelopatides53291N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE
Paelopatides53292NEPHROCYSTIN
Paelopatides53293-
Paelopatides53294OLIGORIBONUCLEASE, MITOCHONDRIAL
Paelopatides53295-
Paelopatides53296-
Paelopatides53297-
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