About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides53237TRANSPOSASE, PUTATIVE-RELATED
Paelopatides53238-
Paelopatides53239-
Paelopatides53240-
Paelopatides53241-
Paelopatides53242PERIPHERAL-TYPE BENZODIAZEPINE RECEPTOR
Paelopatides53243-
Paelopatides53244NADH DEHYDROGENASE (UBIQUINONE) 1 BETA SUBCOMPLEX, 4
Paelopatides53245-
Paelopatides53246L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides53247ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 12
Paelopatides532495-OXOPROLINASE RELATED
Paelopatides53250-
Paelopatides53251DUF614 FAMILY PROTEIN-RELATED
Paelopatides53252-
Paelopatides53253GLUCOSE-6-PHOSPHATE ISOMERASE
Paelopatides53254-
Paelopatides53255RIKEN CDNA 4931406P16 GENE
Paelopatides53256-
Paelopatides53257-
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