About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides53197GALACTOSE-3-O-SULFOTRANSFERASE
Paelopatides53198-
Paelopatides53199SI:CH211-196P9.1-RELATED
Paelopatides53200CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides53201LD39211P
Paelopatides53202LD39211P
Paelopatides53203LD39211P
Paelopatides53204LD39211P
Paelopatides53205SIMILAR TO CDNA SEQUENCE BC052040
Paelopatides53206AMSH-LIKE PROTEASE
Paelopatides53207GLUTATHIONE S-TRANSFERASE
Paelopatides53208GLUTATHIONE S-TRANSFERASE
Paelopatides53209GLUTATHIONE S-TRANSFERASE
Paelopatides53210PEROXISOMAL MEMBRANE PROTEIN PEX14
Paelopatides53211GLUTATHIONE S-TRANSFERASE
Paelopatides53212-
Paelopatides53213BONUS, ISOFORM C-RELATED
Paelopatides53214BONUS, ISOFORM C-RELATED
Paelopatides53215SODIUM/NUCLEOSIDE COTRANSPORTER
Paelopatides53216ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
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