About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides53112CALCIUM-DEPENDENT SECRETION ACTIVATOR
Paelopatides53113BUCENTAUR RELATED
Paelopatides53114CALCIUM-DEPENDENT SECRETION ACTIVATOR
Paelopatides53115MELANOMA-ASSOCIATED ANTIGEN MAGE ANTIGEN
Paelopatides53116-
Paelopatides53117RETROTRANSPOSON
Paelopatides53118RETROTRANSPOSON
Paelopatides53119-
Paelopatides53120-
Paelopatides53121CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides53122THAP DOMAIN-CONTAINING PROTEIN 6
Paelopatides53123TRANSIENT RECEPTOR POTENTIAL CHANNEL
Paelopatides53124ATP-BINDING CASSETTE ABC TRANSPORTER-RELATED
Paelopatides53125LEUCINE-RICH REPEAT-CONTAINING PROTEIN 34
Paelopatides53126LEUCINE-RICH REPEAT-CONTAINING PROTEIN 34
Paelopatides53127PROTEIN DISPATCHED HOMOLOG 3
Paelopatides53128PROTEIN DISPATCHED HOMOLOG 3
Paelopatides53129PROTEIN DISPATCHED HOMOLOG 3
Paelopatides53130NETRIN RECEPTOR UNC5
Paelopatides53133-
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