About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides53298-
Paelopatides53299-
Paelopatides53300-
Paelopatides53301-
Paelopatides53302SODIUM/POTASSIUM/CALCIUM EXCHANGER
Paelopatides53303ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides53304ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides53305-
Paelopatides53306NETRIN/LAMININ-RELATED
Paelopatides53307-
Paelopatides5330830S RIBOSOMAL PROTEIN S2 PROKARYOTIC AND ORGANELLAR
Paelopatides53309-
Paelopatides53310-
Paelopatides53311NETRIN/LAMININ-RELATED
Paelopatides53312NETRIN/LAMININ-RELATED
Paelopatides53313NETRIN/LAMININ-RELATED
Paelopatides53314TETRATRICOPEPTIDE REPEAT PROTEIN 6
Paelopatides53315-
Paelopatides5331630S RIBOSOMAL PROTEIN S2 PROKARYOTIC AND ORGANELLAR
Paelopatides53317NETRIN/LAMININ-RELATED
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