About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides51686ZGC:195170
Paelopatides51687-
Paelopatides51688PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides51690-
Paelopatides51691MYOSIN
Paelopatides51692MYOSIN
Paelopatides51693REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides51694-
Paelopatides51695-
Paelopatides51696-
Paelopatides51697-
Paelopatides51698REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides51699ENZYMATIC POLYPROTEIN-RELATED
Paelopatides51700ACYL-COA SYNTHETASE
Paelopatides51701-
Paelopatides51702-
Paelopatides51703-
Paelopatides51704UNCHARACTERIZED
Paelopatides51706-
Paelopatides51707LARGE SUBUNIT GTPASE 1 HOMOLOG-RELATED
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