About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides51646EPM2A-INTERACTING PROTEIN 1
Paelopatides51647G PROTEIN-COUPLED RECEPTOR-RELATED
Paelopatides51648-
Paelopatides51649PORPHOBILINOGEN DEAMINASE
Paelopatides51650DNA POLYMERASE CATALYTIC SUBUNIT
Paelopatides51651-
Paelopatides51652-
Paelopatides51653-
Paelopatides51654-
Paelopatides51655-
Paelopatides51656RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN
Paelopatides51657SERINE/THREONINE-PROTEIN KINASE PIM
Paelopatides51658-
Paelopatides51659-
Paelopatides51660INHIBITOR OF APOPTOSIS
Paelopatides51661DDE_TNP_IS1595 DOMAIN-CONTAINING PROTEIN
Paelopatides51662THYMIDYLATE SYNTHASE 1
Paelopatides51663-
Paelopatides51664MULTICOPPER OXIDASE-RELATED
Paelopatides51665-
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