About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides51518-
Paelopatides51519GENETIC SUPPRESSOR ELEMENT 1
Paelopatides51520G-PROTEIN COUPLED RECEPTOR
Paelopatides51521MICROSOMAL SIGNAL PEPTIDASE 25 KDA SUBUNIT
Paelopatides51522MICROSOMAL SIGNAL PEPTIDASE 25 KDA SUBUNIT
Paelopatides51523ACYL-COA THIOESTERASE
Paelopatides51524ACYL-COA THIOESTERASE
Paelopatides51525-
Paelopatides51526PROTEIN CBG26694
Paelopatides51527CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED
Paelopatides51528CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED
Paelopatides51529-
Paelopatides51530UNCHARACTERIZED
Paelopatides51531-
Paelopatides51532-
Paelopatides51533ACYL-COA SYNTHETASE
Paelopatides51534PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides51535-
Paelopatides51536-
Paelopatides51537DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER
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