About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides51752UNC-13-4A, ISOFORM B
Paelopatides51753-
Paelopatides51754AUTOCRINE PROLIFERATION REPRESSOR PROTEIN A
Paelopatides51755INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides51756-
Paelopatides51757CYTOCHROME P450 FAMILY 46 SUBFAMILY A
Paelopatides51758RB1-INDUCIBLE COILED-COIL
Paelopatides51759RB1-INDUCIBLE COILED-COIL
Paelopatides51760-
Paelopatides51761-
Paelopatides51762-
Paelopatides51763DUF3504 DOMAIN-CONTAINING PROTEIN
Paelopatides51764-
Paelopatides51765-
Paelopatides51766-
Paelopatides51767PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides51768-
Paelopatides51769-
Paelopatides51770RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Paelopatides51771TUBULIN
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