About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides51792CYTOCHROME P450 FAMILY 3
Paelopatides51793CYTOCHROME P450 FAMILY 3
Paelopatides51794-
Paelopatides51795-
Paelopatides51796HISTONE-LYSINE N-METHYLTRANSFERASE SETD2
Paelopatides51797HISTONE-LYSINE N-METHYLTRANSFERASE SETD2
Paelopatides51798-
Paelopatides51799-
Paelopatides51800-
Paelopatides51801CRUMBS FAMILY MEMBER
Paelopatides51802REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides51803BUCENTAUR RELATED
Paelopatides51804REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides51805LATROPHILIN RECEPTOR-LIKE PROTEIN A
Paelopatides51806-
Paelopatides51807FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides51808UNCHARACTERIZED
Paelopatides51809-
Paelopatides51810PEPTIDASE
Paelopatides51811DDB1- AND CUL4-ASSOCIATED FACTOR 4-RELATED
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