About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides51732PHYTOENE DEHYDROGENASE
Paelopatides5173360S RIBOSOMAL PROTEIN L26 FAMILY MEMBER
Paelopatides51734FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides51735FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides51736REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides51737-
Paelopatides51738-
Paelopatides51739CARBOXYPEPTIDASE REGULATORY REGION-CONTAINING
Paelopatides51740PROTHROMBIN
Paelopatides51741EGF-LIKE DOMAIN-CONTAINING PROTEIN
Paelopatides51742-
Paelopatides51743-
Paelopatides51744-
Paelopatides51745-
Paelopatides51746-
Paelopatides51747-
Paelopatides51748HEART DEVELOPMENT PROTEIN WITH EGF-LIKE DOMAINS 1
Paelopatides51749-
Paelopatides51750PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides51751PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
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