About Trachythela sp. YZ-2020

Cold-water corals Trachythela sp. YZ-2020 are important habitats for creatures in the deep-sea environment, but they have been degraded by anthropogenic activity. They live in the cold, dark, and hypoxic deep-sea waters and are widespread around the world. Most of them must attach to hard-bottom substrates to grow, and only a few can live on soft sediments. Due to the lack of symbiotic zooxanthellae, they do not require sunlight as a source of energy, and their major source of nutrients is the microscopic zooplankton that comes from passing currents or descends from the surface of the ocean.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Trachythela sp. YZ-2020CnidariaTrachythela sp., Cold-water corals (CWCs)Cold seep/Hydrothermal vent~1068slope of the Xisha Trough (18°53′N, 112°66′E, July 2019) in the South China Sea (SCS)2770514

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
IDSSE_Tra_sp_1.0578.2MbContig2020JADLSH01Institute of Deep-Sea Science and Engineering,Chinese Academy of SciencesPRJNA66197590.70%35,305

References
TitleJournalPubmed ID
The First Draft Genome of a Cold-Water Coral Trachythela sp. (Alcyonacea: Stolonifera: Clavulariidae)Genome Biology and Evolution33331875

Gene Information

<< First 222 223 224 225 226 227 228 229 230 231 Forward> Last>>        725 pages in total

Gene IDDescription
Clavulariidae_g20212
Clavulariidae_g20213
Clavulariidae_g20214
Clavulariidae_g20215
Clavulariidae_g20216MULTICOPPER OXIDASE-RELATED
Clavulariidae_g20217MULTICOPPER OXIDASE-RELATED
Clavulariidae_g20218
Clavulariidae_g20219SI:CH211-108C17.2-RELATED-RELATED
Clavulariidae_g2022
Clavulariidae_g20220REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g20221TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Clavulariidae_g20222NEUROTRANSMITTER GATED ION CHANNEL
Clavulariidae_g20223
Clavulariidae_g20224REVERSE TRANSCRIPTASES
Clavulariidae_g20225REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g20226
Clavulariidae_g20227RETROTRANSPOSON
Clavulariidae_g20228PROTEIN CBG26694
Clavulariidae_g20229SI:CH211-108C17.2-RELATED-RELATED
Clavulariidae_g2023PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47
Clavulariidae_g20230CXC DOMAIN-CONTAINING PROTEIN-RELATED
Clavulariidae_g20231CXC DOMAIN-CONTAINING PROTEIN-RELATED
Clavulariidae_g20232RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN
Clavulariidae_g20233L1 TRANSPOSABLE ELEMENT-RELATED
Clavulariidae_g20234TRIHELIX TRANSCRIPTION FACTOR ASIL2
Clavulariidae_g20235UNCHARACTERIZED
Clavulariidae_g20236TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Clavulariidae_g20237REVERSE TRANSCRIPTASES
Clavulariidae_g20238
Clavulariidae_g20239FLAP ENDONUCLEASE FAMILY MEMBER
Clavulariidae_g2024KRUEPPEL-LIKE TRANSCRIPTION FACTOR
Clavulariidae_g20240
Clavulariidae_g20241DNA POLYMERASE
Clavulariidae_g20242CXC DOMAIN-CONTAINING PROTEIN-RELATED
Clavulariidae_g20243THAP DOMAIN PROTEIN
Clavulariidae_g20244THAP DOMAIN PROTEIN
Clavulariidae_g20245REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g20246
Clavulariidae_g20247
Clavulariidae_g20248
Clavulariidae_g20249
Clavulariidae_g2025
Clavulariidae_g20250SI:CH211-108C17.2-RELATED-RELATED
Clavulariidae_g20251REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g20252
Clavulariidae_g20253
Clavulariidae_g20254PROTEIN, PUTATIVE-RELATED
Clavulariidae_g20255CXC DOMAIN-CONTAINING PROTEIN-RELATED
Clavulariidae_g20256SI:CH211-108C17.2-RELATED-RELATED
Clavulariidae_g20257ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
TOP