About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides47914-
Paelopatides47915PROTEIN CBG26694
Paelopatides47916TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
Paelopatides47917TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
Paelopatides47918TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
Paelopatides47919FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides47920-
Paelopatides47921TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
Paelopatides47922TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
Paelopatides47923FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides47924SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides47925-
Paelopatides47926-
Paelopatides47927-
Paelopatides47928ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides47929PROLYL 4-HYDROXYLASE ALPHA SUBUNIT
Paelopatides47930PROLYL 4-HYDROXYLASE ALPHA SUBUNIT
Paelopatides47931-
Paelopatides47932-
Paelopatides47934TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN
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