About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides47813REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides47814BUCENTAUR RELATED
Paelopatides47815COLLAGEN ALPHA
Paelopatides47816COLLAGEN ALPHA
Paelopatides47817POL PROTEIN
Paelopatides47818-
Paelopatides47819-
Paelopatides47820-
Paelopatides47821-
Paelopatides47822ADAM10/ADAM17 METALLOPEPTIDASE FAMILY MEMBER
Paelopatides47823-
Paelopatides47824INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN
Paelopatides47825-
Paelopatides47826ANOCTAMIN
Paelopatides47827ANOCTAMIN
Paelopatides47828ANOCTAMIN
Paelopatides47829UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
Paelopatides47830ANKYRIN REPEAT PROTEIN
Paelopatides47831DFG10 PROTEIN
Paelopatides47832UNCHARACTERIZED
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