About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides47853U7 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM10
Paelopatides47854FANCONI ANEMIA GROUP G PROTEIN FAMILY MEMBER
Paelopatides47855-
Paelopatides47856ZINC FINGER PROTEIN ZIC AND GLI
Paelopatides47857STOMATIN-LIKE PROTEIN 2, MITOCHONDRIAL
Paelopatides47858REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides47859ASPARTYL/LYSYL-TRNA SYNTHETASE
Paelopatides47860SEMAPHORIN
Paelopatides47861SEMAPHORIN
Paelopatides47862PROTEIN CBG26694
Paelopatides47863-
Paelopatides47864N-ACETYLGALACTOSAMINYLTRANSFERASE
Paelopatides47865FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
Paelopatides47866PROTEIN CBG26694
Paelopatides47867PROTEIN CBG26694
Paelopatides47868ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides47869-
Paelopatides47870-
Paelopatides47871ATP-DEPENDENT RNA HELICASE RHLE-RELATED
Paelopatides47872REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
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