About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides47894INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN FAMILY MEMBER
Paelopatides47895NUDIX HYDROLASE
Paelopatides47896NUCLEAR HORMONE RECEPTOR
Paelopatides47897-
Paelopatides47898-
Paelopatides47899-
Paelopatides47900MAP-KINASE ACTIVATING DEATH DOMAIN PROTEIN MADD /DENN/AEX-3 C.ELEGANS
Paelopatides47901CENTROSOMAL PROTEIN 2
Paelopatides47902-
Paelopatides47903-
Paelopatides47904PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides47905-
Paelopatides47906-
Paelopatides47907EXPRESSED PROTEIN
Paelopatides47908IQ DOMAIN-CONTAINING PROTEIN H
Paelopatides47909SOLUTE CARRIER FAMILY 22 MEMBER
Paelopatides47910SOLUTE CARRIER FAMILY 22 MEMBER
Paelopatides47911SOLUTE CARRIER FAMILY 22 MEMBER
Paelopatides47912REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides47913REVERSE TRANSCRIPTASES
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