About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides47956SYNDROMES PUTATIVE CHAPERONIN-RELATED
Paelopatides47957TRANSPOSASE, PUTATIVE-RELATED
Paelopatides47958-
Paelopatides47959UNCHARACTERIZED
Paelopatides47960EXPRESSED PROTEIN
Paelopatides47961-
Paelopatides47962-
Paelopatides47963-
Paelopatides47964ANDROGEN-INDUCED PROTEIN 1-RELATED
Paelopatides47965-
Paelopatides47966-
Paelopatides47967REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides47968DEHYDROGENASES, SHORT CHAIN
Paelopatides47969PEROXISOMAL MULTIFUNCTIONAL ENZYME TYPE 2-RELATED
Paelopatides47970POL PROTEIN
Paelopatides47971-
Paelopatides47972EKC/KEOPS COMPLEX SUBUNIT PCC1 FAMILY MEMBER
Paelopatides47973TYROSINE PHOSPHATSE N18, PUTATIVE-RELATED
Paelopatides47974TYROSINE PHOSPHATSE N18, PUTATIVE-RELATED
Paelopatides47975PROPERDIN
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