About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides47935GDP-L-FUCOSE SYNTHASE
Paelopatides47936TYROSINE-PROTEIN KINASE
Paelopatides47937GTP-BINDING
Paelopatides47938-
Paelopatides47939-
Paelopatides47940-
Paelopatides47941CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides47942-
Paelopatides47943REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides47944SORTING NEXIN
Paelopatides47945INHIBITOR OF APOPTOSIS
Paelopatides47946SI:CH211-196P9.1-RELATED
Paelopatides47947PROTEIN CBG26694
Paelopatides47948PROTEIN CBG26694
Paelopatides47949REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides47951RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Paelopatides47952-
Paelopatides47953-
Paelopatides47954-
Paelopatides47955-
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