About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides47833MULTIFUNCTIONAL PROTEIN ADE2
Paelopatides47834ZINC FINGER PROTEIN 330
Paelopatides47835DACHSHUND
Paelopatides47836DACHSHUND
Paelopatides47837SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Paelopatides47838INWARD RECTIFIER POTASSIUM CHANNEL
Paelopatides47839-
Paelopatides47840-
Paelopatides47841G BETA-LIKE PROTEIN GBL
Paelopatides47842UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
Paelopatides47843DRAB11-RELATED
Paelopatides47844CDK5 REGULATORY SUBUNIT-ASSOCIATED PROTEIN 1
Paelopatides47845TRANSPOSON
Paelopatides47846-
Paelopatides47847-
Paelopatides47848RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides47849N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE
Paelopatides47850DUF614 FAMILY PROTEIN-RELATED
Paelopatides47851-
Paelopatides47852-
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