About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides47792MYOTUBULARIN-RELATED
Paelopatides47793-
Paelopatides47794PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides47795TYROSINE-PROTEIN KINASE
Paelopatides47796-
Paelopatides47797-
Paelopatides47798PROTEIN CBG26694
Paelopatides47799BONUS, ISOFORM C-RELATED
Paelopatides47800-
Paelopatides47801-
Paelopatides47802PROTEIN SIDEKICK
Paelopatides47803PROTEIN CBG26694
Paelopatides47804PROTEIN CBG26694
Paelopatides47805HELICASE WITH DEATH DOMAIN-RELATED
Paelopatides47806ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides47807PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides47808-
Paelopatides47809-
Paelopatides47810PROTEIN CBG26694
Paelopatides47811BEN DOMAIN-CONTAINING PROTEIN 6
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