About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides47711PROTEIN CBG26694
Paelopatides47712-
Paelopatides47713IP01015P-RELATED
Paelopatides47714-
Paelopatides47715-
Paelopatides47716ENDONUCLEASE-RELATED
Paelopatides47717-
Paelopatides47718BEN DOMAIN-CONTAINING PROTEIN 5
Paelopatides47719SOLUBLE NSF ATTACHMENT PROTEIN SNAP
Paelopatides47720-
Paelopatides47721CGI-140
Paelopatides47722EXPRESSED PROTEIN
Paelopatides47723MULTI-COPPER OXIDASE
Paelopatides47724-
Paelopatides47725-
Paelopatides47726AP COMPLEX SUBUNIT MU
Paelopatides47727PROTEIN CBG26694
Paelopatides47728-
Paelopatides47729TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 1
Paelopatides47730TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 1
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