About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides47772EPM2A-INTERACTING PROTEIN 1
Paelopatides47773PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Paelopatides47774-
Paelopatides47775CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides47776-
Paelopatides47777-
Paelopatides47778PROTEIN CBG26694
Paelopatides47779ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides47780UNCHARACTERIZED
Paelopatides47781-
Paelopatides47782SODIUM/POTASSIUM/CALCIUM EXCHANGER
Paelopatides47783ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides47784SODIUM/POTASSIUM/CALCIUM EXCHANGER
Paelopatides47785CXXC-TYPE ZINC FINGER PROTEIN 1
Paelopatides47786-
Paelopatides47787-
Paelopatides47788PROTEIN CBG26694
Paelopatides47789ADHESION G PROTEIN-COUPLED RECEPTOR G7
Paelopatides47790GEM-ASSOCIATED PROTEIN 6
Paelopatides47791N-ACETYLGLUCOSAMINE-6-PHOSPHATE DEACETYLASE
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